| MASTER ALUMNI |
| NAME |
THESIS TITLE |
ADVISOR |
YEAR |
| Anıl Berk DELİKAYA |
Neuromodulatory effect of bilateral rhythmic tactile stimulation on recognition memory |
Assoc. Prof. Dr. Tolga Esat ÖZKURT |
2022 |
| Mehmet Tunahan SARIOĞLU |
A comparison of deep neural network architectures for COVID-19 detection using CT chest images |
Prof. Dr. Ünal Erkan MUMCUOĞLU |
2022 |
| Emre Kutlu KÖSE |
An emotion recognition method with low spec ECG and EEG devices |
Prof. Dr. Ünal Erkan MUMCUOĞLU |
2022 |
| Reza YAHYAEI |
Fast EEG based biometrics via mean curve length |
Assoc. Prof. Dr. Tolga Esat ÖZKURT |
2022 |
| Bünyamin SARIGÜL |
Implementation of a patient empowerment platform for integrated care |
Assoc. Prof. Dr. Yeşim AYDIN SON |
2022 |
| Ayşe ÖZDEMİR |
Genotype catalog for the analysis of drug-drug interactions |
Asst. Prof. Dr. Aybar Can ACAR |
2021 |
| Amin ZABARDAST |
A deep learning approach to surface reconstruction for surgical navigation during laparoscopic, endoscopic or robotic surgery |
Prof. Dr. Ünal Erkan MUMCUOĞLU |
2019 |
| Ahmet Levent KANDEMİR |
Resting state brain connectivity via bicoherence and coherence |
Assoc. Prof. Dr. Tolga Esat ÖZKURT |
2018 |
| Anıl KARABULUT |
The effects of intranasal oxytocin during trustworthiness evaluation: context matters |
Assoc. Prof. Dr. Didem GÖKÇAY |
2017 |
| Mahdieh FARZIN ASANJAN |
Semi-automatic segmentation of mitochondria on transmission electron microscopy images using live-wire and surface dragging methods |
Prof. Dr. Ünal Erkan MUMCUOĞLU |
2017 |
| Gizem GÖKTEPE |
Effect of bilateral somatosensory stimulus on oscillatory brain activity and long term memory |
Assoc. Prof. Dr. Tolga Esat ÖZKURT |
2017 |
| Ehsan ZABARDAST |
Prediction of surgical operation durations using supervised machine learning techniques |
Asst. Prof. Dr. Aybar Can ACAR |
2017 |
| Ece ÇAĞLAYAN |
Classification of emotions in vocal responses |
Assoc. Prof. Dr. Tolga Esat ÖZKURT |
2017 |
| Merih Alphan KARADENİZ |
Automatic segmentation of cristae membranes in 3D electron microscopy tomography images using artificial neural networks |
Prof. Dr. Ünal Erkan MUMCUOĞLU |
2016 |
| Aynaz MOHAMMADI ALAMDARI |
Semi-automatic segmentation of mitochondria on electron microscopy images using Kalman filtering approach |
Prof. Dr. Ünal Erkan MUMCUOĞLU |
2016 |
| Kamil ARSLANKOZ |
Functional magnetic resonance imaging (FMRI) simulator |
Assoc. Prof. Dr. Didem GÖKÇAY |
2015 |
| Saber HAFEZQORANI |
Modeling the combined effect of RNA-binding proteins and microRNAs in post-transcriptional regulation |
Assoc. Prof. Dr. Yeşim AYDIN SON |
2015 |
| Mustafa ÇÖÇELLİ |
Semi-automatic/user-guided segmentation of mitochondria on transmission electron microscopy images |
Prof. Dr. Ünal Erkan MUMCUOĞLU |
2015 |
| Deniz VİDİNLİ |
Effects of subliminal affective stimuli on evaluative judgements: a video study on hospitals |
Assoc. Prof. Dr. Didem GÖKÇAY |
2015 |
| İrem NALÇA |
Comparison of visual acuity measurements in C57BL6/J mice using two different behavioral assessment tasks |
Prof. Dr. Havva DOĞRU |
2015 |
| Merve AYGIT |
Automatic Breast Border Segmentation & Automatic Pectoral Muscle Segmentation In Mammography Images |
Prof. Dr. Ünal Erkan MUMCUOĞLU |
2014 |
| Negin BAGHERZADİ |
Post operative prognostic prediction of esophageal cancer cases using Bayesian networks and support vector machines |
Asst. Prof. Dr. Aybar Can ACAR |
2014 |
| Murat KOÇAK |
Bibliometric analysis of clinical medicine publications in Turkey |
Asst. Prof. Dr. Murat Perit ÇAKIR |
2014 |
| Serbülent ÜNSAL |
Multiscale tumor modeling |
Asst. Prof. Dr. Aybar Can ACAR |
2014 |
| Ender YURDAKOÇ |
GeneExpView-heat map visualization of the hierarchically clustered gene expression data |
Asst. Prof. Dr. Aybar Can ACAR |
2013 |
| Yusuf Nasuh ERTURAN |
A method to improve the communication between information technology and healthcare professionals during mobile healthcare application development process |
Prof. Dr. Semih BİLGEN |
2013 |
| Fariba YOUSEFI |
Analysis of methods for finger vein recognition |
Assoc. Prof. Dr. Sinan KALKAN |
2013 |
| Salih CANER |
Predicting the level of knee osteoarthritis by using dimension reduction techniques on time series features of gait data |
Prof. Dr. Ünal Erkan MUMCUOĞLU |
2013 |
| Yusuf SAYITA |
Classification of migraineurs using functional near infrared spectroscopy data |
Prof. Dr. Alptekin TEMİZEL |
2012 |
| Ayşegül KUTLAY |
Analyses of factors affecting acceptance of homecare technologies by patients with chronic diseases |
Prof. Dr. Ünal Erkan MUMCUOĞLU |
2012 |
| İlknur TELKES |
Phase validation of neurotoxic animal models of Parkinson's disease |
Dr. Ewa JAKUBOWSKA DOĞRU |
2012 |
| Seda Nigün DUMLU |
Investigation of semantic effects in oddball paradigm through event related potentials |
Assoc. Prof. Dr. Didem GÖKÇAY |
2012 |
| Onur ERDOĞAN |
Predicting the disease of Alzheimer (AD) with SNP biomarkers and clinical data based decision support system using data mining classification approaches |
Assoc. Prof. Dr. Yeşim AYDIN SON |
2012 |
| Saba ÖZ |
Usability testing of a family medicine information system |
Asst. Prof. Dr. Murat Perit ÇAKIR |
2012 |
| Hikmet Emre KALE |
Segmentation of human facial muscles on CT and MRI data using level set and Bayesian methods |
Prof. Dr. Ünal Erkan MUMCUOĞLU |
2011 |
| Özlem ÖZKAN |
Attitudes and opinions of people who use medical services about privacy and confidentiality of health information in electronic environment |
Dr. Ali ARİFOĞLU |
2011 |
| Mustafa Ulaş ÇİFTÇİOĞLU |
Improving the sub-cortical gm segmentation using evolutionary hierarchical region merging |
Assoc. Prof. Dr. Didem GÖKÇAY |
2011 |
| İdil ERTE |
Bivariate random effects and hierarchical meta-analysis of summary receiver operating characteristic curve on fine needle aspiration cytology |
Prof. Dr. Nazife BAYKAL |
2011 |
| Emrah AKKOYUN |
Parallelization of functional flow to predict protein functions |
Prof. Dr. Tolga CAN |
2010 |
| Musa Kazım ÖZDEMİR |
A framework for authentication of medical reports based on keystroke dynamics |
Assoc. Prof. Dr. Didem GÖKÇAY |
2010 |
| Elif ÇAKIR TURGUT |
Online health information seeking behavior of middle aged and older people: a case study |
Prof. Dr. Nazife BAYKAL |
2010 |
| Kemal Doğuş TÜRKAY |
Simulated FMRI toolbox |
Assoc. Prof. Dr. Didem GÖKÇAY |
2009 |
| Cem Nuri ALDAŞ |
An analysis of peculiarity oriented interestingness measures on medical data |
Assoc. Prof. Dr. Tuğba TAŞKAYA TEMİZEL |
2008 |
| Selim NAR |
A virtual human animation tool using motion capture data |
Prof. Dr. Yasemin YARDIMCI ÇETİN |
2008 |
| Deniz PEÇEL |
Enhanced hole punching for RSSI location tracking in hospitals |
Prof. Dr. Nazife BAYKAL |
2008 |
| Umut KOÇAK |
Development of dental educational simulation with haptic device |
Prof. Dr. Erhan İlhan KONUKSEVEN |
2007 |
| Mehrdad Alizadeh MIZANI |
An XACML based framework for structured patient privacy policy (s3p) |
Prof. Dr. Nazife BAYKAL |
2006 |
| Ph.D. ALUMNI |
| NAME |
THESIS TITLE |
ADVISOR |
YEAR |
| Görkem POLAT |
Computer-aided estimation of endoscopic activity in ulcerative colitis |
Prof. Dr. Alptekin TEMİZEL |
2023 |
| Heval ATAŞ GÜVENİLİR |
Integration and analysis of biological data for computational drug discovery |
Prof. Dr. Mehmet Volkan ATALAY |
2023 |
| Bengi Ruken YAVUZ |
A Comprehensive analysis of mutations in cancers and neurodevelopmental disorders |
Assoc. Prof. Yeşim AYDIN SON |
2023 |
| Ayşegül TOMBULOĞLU |
Boric acid induced transcriptomic changes in HepG2 cell line at growth inhibitory concentrations |
Assoc. Prof. Yeşim AYDIN SON |
2023 |
| Esra NALBAT |
Exploiting molecular networks by repurposed drugs and novel small molecules in hepatocellular carcinoma cells and stem cells for new therapeutic options |
Prof. Dr. Mehmet Volkan ATALAY |
2023 |
| Sabri Can ÖLÇEK |
Quantification of bradykinesia in parkinson’s disease by using facial images and EMG recordings |
Assoc. Prof. Yeşim AYDIN SON |
2023 |
| Serbülent ÜNSAL |
A Deep learning based protein representation model for low-data protein function prediction |
Asst. Prof. Dr. Aybar Can ACAR |
2023 |
| Aslı BOYRAZ |
Microbiome data analysis using compositional data approach |
Asst. Prof. Dr. Aybar Can ACAR |
2022 |
| Dilek KOPTEKİN |
Genetic history of Anatolia during Holocene |
Prof. Dr. Mehmet SOMEL |
2022 |
| Fulya ÇIRAY |
Artificial learning-based analysis of molecular, clinical trials and patent data for improved drug development |
Assoc. Prof. Yeşim AYDIN SON |
2022 |
| Mehmet Özer METİN |
A technical framework for group studies of diffusion tensor imaging |
Assoc. Prof. Yeşim AYDIN SON |
2022 |
| Burcu YALDIZ |
Integration of machine learning and entropy methods for post-genome-wide association studies analysis |
Assoc. Prof. Yeşim AYDIN SON |
2022 |
| Beste MİMAROĞLU ALTINAY |
MFDM: mri free decision model for diagnosis and treatment selection in patients with low back and neck pain |
Assoc. Prof. Yeşim AYDIN SON |
2022 |
| Arzu Burçak SÖNMEZ |
Construction and analysis of tissue/disease specific protein-protein interaction networks by integrating large scale transcriptome data with genome scale protein-protein interaction networks |
Prof. Dr. Tolga CAN |
2022 |
| Ayşegül KUTLAY |
Integrative predictive modeling of metastasis in melanoma cancer |
Assoc. Prof. Yeşim AYDIN SON |
2022 |
| Damla GÖZEN |
Identification of cellular stress related biomolecules for eventual use in targeted therapies of hepatocellular carcinoma |
Assoc. Prof. Yeşim AYDIN SON |
2021 |
| Kübra NARCI |
Systems biology analysis of kinase inhibitors in liver cancer cells using next generation sequencing data |
Assoc. Prof. Yeşim AYDIN SON |
2021 |
| Şeyma ÜNSAL BEYGE |
Integrative network modelling of drug responses in cancer for revealing mechanism of action |
Assoc. Prof. Dr. Nurcan TUNÇBAĞ |
2021 |
| Gülşah KARADUMAN |
Genome-wide sequence analysis of human splice acceptor regions for motif discovery |
Assoc. Prof. Dr. Yeşim AYDIN SON |
2021 |
| Mustafa DEĞERLİ |
Salient constructs to enhance the acceptance of wearable medical devices: an exploratory research |
Prof. Dr. Sevgi ÖZKAN YILDIRIM |
2020 |
| Emrah AKKOYUN |
Growth model for abdominal aortic aneurysms using longitudinal CT images |
Asst. Prof. Dr. Aybar Can ACAR |
2020 |
| Mine CÜNEYİTOĞLU ÖZKUL |
Single-image bayesian restoration and multi-image super-resolution restoration for b-mode ultrasound images using an accurate system model |
Prof. Dr. Ünal Erkan MUMCUOĞLU |
2019 |
| Igor MAPELLI |
Brain oscillatory analysis of visual working memory errors |
Assoc. Prof. Dr. Tolga Esat ÖZKURT |
2019 |
| Özlem ÖZKAN |
Essential design components of genetic data enabled mobile personal health record systems |
Assoc. Prof. Dr. Yeşim AYDIN SON |
2018 |
| Arif YILMAZ |
Optimization of weights and features in use of AHP for SNP prioritization |
Assoc. Prof. Dr. Yeşim AYDIN SON |
2018 |
| Deniz KATIRCIOĞLU |
A window-based characterization method for biophysical time series |
Prof. Dr. Nazife BAYKAL |
2017 |
| Cengizhan AÇIKEL |
Genomic modeling of bipolar disorders: comparison of multifactor dimension reduction and classification-based data mining methods |
Assoc. Prof. Dr. Yeşim AYDIN SON |
2017 |
| Serdar BALTACI |
Fusion of pupil dilation and facial temperature features for detection of stress |
Assoc. Prof. Dr. Didem GÖKÇAY |
2016 |
| Aykut EKEN |
Investigating pain perception in somatosensory cortex for healthy and fibromyalgia patient populations by using fNIRS |
Assoc. Prof. Dr. Didem GÖKÇAY |
2016 |
| Ahmet Raşit ÖZTÜRK |
A multiplex primer design algorithm for target amplification of continuous genomic regions |
Prof. Dr. Tolga CAN |
2016 |
| Bahar TERCAN |
Gene function inference from expression using probabilistic topic models |
Asst. Prof. Dr. Aybar Can ACAR |
2016 |
| Faris Serdar TAŞEL |
Detection and segmentation of mitochondria from electron microscope tomography images |
Prof. Dr. Ünal Erkan MUMCOĞLU |
2016 |
| Ayhan Ozan YILMAZ |
An infrastructure for efficient reporting workflow in grid based teleradiology applications |
Prof. Dr. Nazife BAYKAL |
2015 |
| Timur BEYAN |
Single nucleotide polymorphism (SNP) data integrated electronic health record (EHR) for personalized medicine |
Assoc. Prof. Dr. Yeşim AYDIN SON |
2014 |
| Serdar Murat ÖZTANER |
A Bayesian modeling and estimation framework for pharmacogenomics driven warfarin dosing |
Assoc. Prof. Dr. Tuğba TAŞKAYA TEMİZEL |
2014 |
| Öykü EREN ÖZSOY |
Integer linear programming based solutions for construction of biological network |
Prof. Dr. Tolga CAN |
2014 |
| Hüsamettin GÜL |
A predictive model for type 2 diabetes mellitus based on genomic and phenotypic risk factors |
Assoc. Prof. Dr. Yeşim AYDIN SON |
2014 |
| Beyza AKBAŞOĞLU |
Usability evaluation of mobile information and communications technology in health care |
Prof. Dr. Nazife BAYKAL |
2013 |
| Mehrdad ALIZADEH MIZANI |
A multi-layer model for privacy preserving policy making for disclosure of public health data |
Prof. Dr. Nazife BAYKAL |
2013 |
| Sait Can YÜCEBAŞ |
A hybrid feature selection model for genome wide association studies |
Prof. Dr. Nazife BAYKAL |
2013 |
| Güney GÜRSEL |
Expectation based evaluation framework for hospital information systems |
Prof. Dr. Osman SAKA |
2012 |
| Özkan YILDIZ |
A comprehensive model for measuring health care process quality: health care process quality measurement model (HPQMM) |
Prof. Dr. Onur DEMİRÖRS |
2012 |
| Fahri Salih KOCABAŞ |
Knowledge discovery in microarray data of bioinformatics |
Prof. Dr. Nazife BAYKAL |
2012 |
| Umut ARIÖZ |
Developing subject specific frequency lowering algorithms with simulated hearing loss for the enhancement of sensorineural hearing loss |
Assoc. Prof. Dr. Banu GÜNEL KILIÇ |
2012 |
| Pınar YILDIRIM |
Acquisition of liver specific parasites-bacteria-drugsdiseases-genes knowledge from medline |
Prof. Dr. Osman SAKA |
2011 |
| Ergin SOYSAL |
Ontology based information extraction on free text radiological reports using natural language processing approach |
Prof. Dr. İlyas ÇİÇEKLİ |
2010 |
| Kaya KURU |
A novel report generation approach for medical applications: the SISDS methodology and its applications |
Assoc. Prof. Dr. Kemal ARDA |
2010 |
| Oya Deniz KOÇGİL BEYAN |
Performance measurement of the healthcare systems: A proposal for Turkish Health System |
Prof. Dr. Nazife BAYKAL |
2010 |
| Kemal Hakan GÜLKESEN |
A patient-oriented decision support framework and its application to biopsy decision for prostatic carcinoma |
Prof. Dr. Osman SAKA |
2009 |